PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018102-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 334aa MW: 38348.3 Da PI: 5.0543

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018102-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.4	9.2e-56	18	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i e+d++k+ePwdLp+++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ AUR62018102-RA 18 LPPGFRFHPTDEELITHYLSEKVLDSNFST-IAIGEADLNKIEPWDLPSQAKMGEKEWYFFVVRDRKYPTGLRTNRATEAGYWKATGKDKEIFK- 110 79***********************999.88***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 + lvg+kktLvfy+grapkgekt+Wvmheyrle AUR62018102-RA 111 AKVLVGMKKTLVFYTGRAPKGEKTNWVMHEYRLE 144 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MEMDNYSTIT IEDENMELPP GFRFHPTDEE LITHYLSEKV LDSNFSTIAI GEADLNKIEP 60 WDLPSQAKMG EKEWYFFVVR DRKYPTGLRT NRATEAGYWK ATGKDKEIFK AKVLVGMKKT 120 LVFYTGRAPK GEKTNWVMHE YRLEGKLSKY NLPKNAKNDW VISRVFKKNS GAKKPDYMEV 180 VSLEELQPNF LPPLMDSSPY NNGETKAVDA NPSHVTCFSH PSMVENQQFK LTKQEETTTN 240 MFNNIPCSPL FRTYSRTSLT NMLSEPEMPD FQFVDSLFNQ DQPMMKLLLE GKESNPTKEE 300 LPGIDMSSSG ISNHDIVNNN QIGPFDHDCL WDY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-107	NAC family protein