PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017788-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 370aa MW: 41730.6 Da PI: 4.745

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017788-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.2	1e-29	181	231	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 prlrWtpeLH++Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ AUR62017788-RA 181 PRLRWTPELHRCFVHAIERLGGQDKATPKLVLQLMDVRGLTISHVKSHLQD 231 8*************************************************6 PP
2	Myb_DNA-binding	46.2	1.1e-14	182	232	1	47
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 r+rWT+e++ +v+a+++lGg t+k++ + m g+t ++ks++q++ AUR62017788-RA 182 RLRWTPELHRCFVHAIERLGGQdkaTPKLVLQLMDvRGLTISHVKSHLQDH 232 89***********************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MDGKSPPGPI GESSITPNEN CDGNGAQLLL YDDDRVCLDI EKTWLDVQNY YNEILREKDE 60 RKPKKLTPRR EKTNDTIATP FDIPIISQSH LSQMHQLFNI MKGIVIQKIV PQIIDVGLDD 120 LDARDETVDV GVRTGEGSAI FVKKLKKNVV DPLESEDEVG DPLHSDEGED SELDYVRSKV 180 PRLRWTPELH RCFVHAIERL GGQDKATPKL VLQLMDVRGL TISHVKSHLQ DHVFNFHHLL 240 AVQPDQSHFL KLQETMAYEQ VSDQNQAHYF NSDAFFSSMK QTKDQYKENE DDEEIAIEKR 300 DNEHGISLSL SLQRVALPPL LMQRSSNVSS TNVSEISDQA ISSYSSSSIA WDNHQQSLNL 360 DLSISLCGS*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MDGKSPPGPI GESSITPNEN CDGNGAQLLL YDDDRVCLDI EKTWLDVQNY YNEILREKDE  60
RKPKKLTPRR EKTNDTIATP FDIPIISQSH LSQMHQLFNI MKGIVIQKIV PQIIDVGLDD  120
LDARDETVDV GVRTGEGSAI FVKKLKKNVV DPLESEDEVG DPLHSDEGED SELDYVRSKV  180
PRLRWTPELH RCFVHAIERL GGQDKATPKL VLQLMDVRGL TISHVKSHLQ DHVFNFHHLL  240
AVQPDQSHFL KLQETMAYEQ VSDQNQAHYF NSDAFFSSMK QTKDQYKENE DDEEIAIEKR  300
DNEHGISLSL SLQRVALPPL LMQRSSNVSS TNVSEISDQA ISSYSSSSIA WDNHQQSLNL  360
DLSISLCGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-28	G2-like family protein