PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017439-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 695aa MW: 79465.6 Da PI: 7.5435

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017439-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.3	1.6e-20	78	171	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + +++k +r+r+++r+gC+a l+++k++ ++w+vt ++ +HnH+l AUR62017439-RA 78 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKVANENKPQRNRKSSRCGCQAYLRINKTTelgISEWRVTGFVDHHNHDLL 171 6************9998877356667999*************9******************9988889***********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MSVVSLLDLG CEKNILSHQE DIHPVVVYDD PSDQRSLSLD DISSADDSPN ETCLSLELTN 60 EVVPYIGQRF TSHDSAYEFY SEFAKRCGFS IRRHRTEGKD GVGKGLTRRY FVCHRAGNTP 120 VKVANENKPQ RNRKSSRCGC QAYLRINKTT ELGISEWRVT GFVDHHNHDL LEPNQVRFLP 180 AYRNISENDK SRIFMYAKTG ISVQQMMKLL ELEKCVEPGF LPFTEKDVRN LIQSFRKLDP 240 EEDSIDLLKM CSNIKEKDHN FRFEYTLDLN NNLENIAWSY ASSVEAYGMF GDAVVFDTTH 300 RLTAFDMPLG IWIGINNYGM PCFFSCVLLR EENLRSLSWA LKVFLGFMNG KAPHTILTDQ 360 NMCLKEAVTA EMPTTKHALC IWLIVAKFPS WFNSVLGERY NEWKEEFYRL YNLESIDEFE 420 LGWRDMIYSF GLPSNKHIAN LFALRSLWAV SYLRSHFMAG LTTTGQSKSI NAFIQRFLSA 480 QTRLAHFVEQ VAVAVDFKDQ AGEQRTMQQN LQNINLKTGA PMEAHAASVL TPFAFIKLQE 540 QLVLAAHYAS FQMEDGFLVR HHTKLQGGRK VYWDLQLGII SCSCDQFEFS GILCRHALRV 600 LSTGNCFQIP ERYLPQRWRR FNSSALKPQS TLTDHGEKVK RLQSMVSTLV SESSKSKERL 660 DLATEQVSVL LSQIKDQPIS TSFVSRGATV HRCF*

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MSVVSLLDLG CEKNILSHQE DIHPVVVYDD PSDQRSLSLD DISSADDSPN ETCLSLELTN  60
EVVPYIGQRF TSHDSAYEFY SEFAKRCGFS IRRHRTEGKD GVGKGLTRRY FVCHRAGNTP  120
VKVANENKPQ RNRKSSRCGC QAYLRINKTT ELGISEWRVT GFVDHHNHDL LEPNQVRFLP  180
AYRNISENDK SRIFMYAKTG ISVQQMMKLL ELEKCVEPGF LPFTEKDVRN LIQSFRKLDP  240
EEDSIDLLKM CSNIKEKDHN FRFEYTLDLN NNLENIAWSY ASSVEAYGMF GDAVVFDTTH  300
RLTAFDMPLG IWIGINNYGM PCFFSCVLLR EENLRSLSWA LKVFLGFMNG KAPHTILTDQ  360
NMCLKEAVTA EMPTTKHALC IWLIVAKFPS WFNSVLGERY NEWKEEFYRL YNLESIDEFE  420
LGWRDMIYSF GLPSNKHIAN LFALRSLWAV SYLRSHFMAG LTTTGQSKSI NAFIQRFLSA  480
QTRLAHFVEQ VAVAVDFKDQ AGEQRTMQQN LQNINLKTGA PMEAHAASVL TPFAFIKLQE  540
QLVLAAHYAS FQMEDGFLVR HHTKLQGGRK VYWDLQLGII SCSCDQFEFS GILCRHALRV  600
LSTGNCFQIP ERYLPQRWRR FNSSALKPQS TLTDHGEKVK RLQSMVSTLV SESSKSKERL  660
DLATEQVSVL LSQIKDQPIS TSFVSRGATV HRCF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein