PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017336-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 267aa MW: 30397.7 Da PI: 6.8852

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017336-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.7e-11	99	150	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + h e+Er+RR ++ s L++llP +++K s ++ L +Av+YIk++q AUR62017336-RA 99 KIIHREIERKRRLEMSSLHTSLKSLLPVeY---TKGKRSISDHLGEAVKYIKQMQ 150 5669**********************77...******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MTNLFSSIMF DPLCSQNNEI FLDISDFVPS TQFEGDQITP ILLEPQHNYD LDNLFNEIPT 60 FIEDPPLKPN LNRKKRSLAI VHDQENNGIN PYDSKKKKKI IHREIERKRR LEMSSLHTSL 120 KSLLPVEYTK GKRSISDHLG EAVKYIKQMQ QKMQVLNEKR DTLTKEVSKL EGHKKYDNDV 180 IVNVKKENVE VIVSSNCRED DENEGQGLPL SKVLQCLVQE GLDVLSSTSK KINTIFVHSI 240 QAQAGEDGKI AIDATNLKNK IADIQR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	99	RKKRSLAIVHDQENNGINPYDSKKKKK
2	95	110	KKKKKIIHREIERKRR
3	96	111	KKKKKIIHREIERKRR
4	106	111	ERKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	1e-17	bHLH family protein