PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017297-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 226aa    MW: 25017.8 Da    PI: 4.87
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017297-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.6e-174595155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++   +rWv+e+r p  n+ + r++lg++ tae+Aa+a++ a+++l+g
  AUR62017297-RA 45 PVYRGVRQRN-GNRWVCEVRPP--NN-KSRIWLGTYPTAEMAARAHDVAALALKG 95
                    68*****999.9******6666..44.7************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDGGNMQWID PNAPRGSHSD DEMVLASSCP KKKAGRKKFK ETRHPVYRGV RQRNGNRWVC  60
EVRPPNNKSR IWLGTYPTAE MAARAHDVAA LALKGRTACL NFADSAWRLR VPASTDTRDI  120
QKAAAEAAQA FAGEGPEMHV GESSNINDNV IEAYAGDNEV RNNNCEALQG NVEYMDDEAL  180
YDMPGLLVNM AEGLLLPPPH NPYEEFSWND TESDGYEVSL WSYSI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-65ERF family protein