PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016847-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 289aa    MW: 32600.2 Da    PI: 9.8553
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016847-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind258.24.8e-793428816301
       GAGA_bind  16 paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksids 110
                     ++++l   ++ +l+ ++aerda+++e ++al ekk a+ er+ a  qr+ a++er++a++er+n++ +l+   +     +p     ++g+++   
  AUR62016847-RA  34 EQNALT--MNRNLLNIMAERDAAVEEMKIALLEKKRALEERELAVSQRNLAIKERDEAITERNNAYHTLQNSMR-----QPL----SPGVQCGT- 116
                     334444..999*******************************************************99998444.....344....34444333. PP

       GAGA_bind 111 lqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDe 205
                           ++l+d ++ +++++ l+al  ++a++++ +k        ++++k+k++k+  +   k+++k++++  + ++k++++ ++++ln v++D+
  AUR62016847-RA 117 ------SRLADLPFVTQQMQLLDALC-RTAVPSECNKL-------PQTKKVKESKRCAR---KPREKKTSD--HLKVKNDWDGQNVGLNRVDYDD 192
                     ......34556677666666555544.44443332222.......22233333333333...333333333..3789****************** PP

       GAGA_bind 206 stlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvti 300
                     + +P+P CsCtG+ rqCYkWGnGGWqS+CCttt+S yPLP ++++r aR++grKmS++af+klL+ La+eG+d+sn vDLkd W kHGtn+++ i
  AUR62016847-RA 193 TIMPAPGCSCTGIFRQCYKWGNGGWQSSCCTTTMSAYPLPPVPNKRFARLSGRKMSGSAFSKLLSGLASEGFDFSNLVDLKDRWSKHGTNRYISI 287
                     **********************************************************************************************9 PP

       GAGA_bind 301 r 301
                     +
  AUR62016847-RA 288 K 288
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDAGGLRGGA RRRCDDFRDH SPWNMIAYQH QIKEQNALTM NRNLLNIMAE RDAAVEEMKI  60
ALLEKKRALE ERELAVSQRN LAIKERDEAI TERNNAYHTL QNSMRQPLSP GVQCGTSRLA  120
DLPFVTQQMQ LLDALCRTAV PSECNKLPQT KKVKESKRCA RKPREKKTSD HLKVKNDWDG  180
QNVGLNRVDY DDTIMPAPGC SCTGIFRQCY KWGNGGWQSS CCTTTMSAYP LPPVPNKRFA  240
RLSGRKMSGS AFSKLLSGLA SEGFDFSNLV DLKDRWSKHG TNRYISIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.13e-82BBR-BPC family protein