PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016545-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26032.1 Da PI: 7.5587 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.2 | 1.9e-08 | 117 | 157 | 4 | 51 |
AP2 4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV+++ +++W A I++ + +++lg+ + eeAa ++++a+ AUR62016545-RA 117 TGVYFK--NKKWQAAIKVD-----KIQIHLGTVSSQEEAAHLYDRAAF 157 7**994..68********4.....4********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVSLRRRRLL GLCNGSSTDE NASENATYSS NSASVYPITF NDLNLRAEEG SDPLEEIMEP 60 VTINDSGSSK DKHIQPSIVS STLSKELDTQ RTVEIEVKRR KQHRRRRIHS EEQCAMTGVY 120 FKNKKWQAAI KVDKIQIHLG TVSSQEEAAH LYDRAAFMCG REPNFELAEE EKQQLRKLKW 180 SEFLAMTRSA ISNKKSRRGR VTGKAAPLLQ NSDEGEQGAE ASSASDDAIL DS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 124 | KRRKQHRRRRIHSEEQCAMTGVYFKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 2e-41 | ERF family protein |