PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016036-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 232aa    MW: 25721.8 Da    PI: 5.1408
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016036-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-184898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+G+r++  +g+Wv+e+r+p   +k++r++lg+f tae+Aa+a++ a+ +l+g
  AUR62016036-RA 48 PVYRGIRQRN-NGKWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAMALRG 98
                    68*****999.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MNMSYTNQVS PSDGGMSPNS IEEEGLMLAS AYPKKRAGRK KFMETRHPVY RGIRQRNNGK  60
WVCEVREPNK KTRIWLGTFP TAEMAARAHD VAAMALRGRS GACLNFADSV WRLPVPASSD  120
TKDIQRAAAE AAEAFRPQPP PAEEQQVVAE KAEEVAPSST TTTMNNMSFS NENGMYMHYD  180
MEFETPGLLA DMYHGMGMLP PPNMTGWNET TYEDDDMSNG SADLPLWSHS F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-46ERF family protein