PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015789-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 279aa    MW: 31045.1 Da    PI: 4.4081
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015789-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.9e-15552148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++ Ed  l d+vk+ G g+W+++ r  g+ R++k+c++rw ++l
   AUR62015789-RA  5 KGPWSATEDTVLMDYVKKNGEGNWNAVQRNTGLQRCGKSCRLRWANHL 52
                     79******************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MILKKGPWSA TEDTVLMDYV KKNGEGNWNA VQRNTGLQRC GKSCRLRWAN HLRPNLKKGA  60
FSPDEERLII DLHSKLVDPL SAGFGYDPGF GFGGPGFELP SIRFSQNEQS GGNVYVKVEE  120
DDNGVKVNNN PNVVGRTNSG LLDDLLQESH VKVSVTRERE EDFGLHWDIS SSENSSNGIK  180
KEKMDDQQQK MNFNSQELSN ILELIPTLVQ APSWCNEGVA EGSAPQSSAV SIDDNYNGFD  240
DQMPQPPSFT AVNNTNYEED DGNWNPESYN WDNLPRIC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.23e-39MYB family protein