PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62014855-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 22521.7 Da PI: 9.0054 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64 | 3.2e-20 | 30 | 80 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrdp++ + r++lg+f+taeeAa+a++ a+++++g AUR62014855-RA 30 THFRGVRKRP-WGRYAAEIRDPTK---KSRVWLGTFDTAEEAARAYDDAARAFRG 80 589*******.**********864...6************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MAPKIIGGAA GGGIGVKVNS ANGGVNVKET HFRGVRKRPW GRYAAEIRDP TKKSRVWLGT 60 FDTAEEAARA YDDAARAFRG AKAKTNFPLP SEIHNNNTPL NNLXXXXXXX XXTNNLSSNN 120 NNNRSPSQSS TVESSSHEKP VPTAGMMVES LPLDLNLAGN FAGATAVGVR FPFQQSDSDS 180 SSVVDLNHDL NSGTPRGLEI DLNQPLPSDL A* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-27 | ERF family protein |