PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014750-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 464aa MW: 51325.8 Da PI: 10.0252

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014750-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.9e-08	9	45	1	38
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 + rW t+E+++l av ++G+++W+++a++++ +R+l+ AUR62014750-RA 9 KVRWGTWEELILGGAVLRHGSHNWDAVASELQ-TRSLY 45 679***************************.987 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MVEERGDDKV RWGTWEELIL GGAVLRHGSH NWDAVASELQ TRSLYPYFFT PRAKTMSLAA 60 SSFLLLCQSC GDGGTSIVVA VNVKVCKAKF KVLQECYSDC SAWFEELRKK RVNELRRELE 120 KSEESIGSLE TKLETLKSEK AVCSYADLGC SAAESLEPLV KSGENESSGK DVSRDGSSAG 180 SFTQETRENS IPQCQAAATE ASVEKRERKP VVLEPCIRLE KFPANEKVTK GNVQPVIAPD 240 ANVQNPCTSE QGMDEFVKIL DSIMENEHAS VFRRRLDSQK RARYKRIIRQ HMDLDTIRSR 300 IANKSITSII ELLRDLLLLA NNALVFYSKC TREYKCALVF RDLVTKTLHQ HYKVTGNKFG 360 AAETPNTPMH KPTAKPRSAR PFNSKILNQP VIAVNNAQGT SIVVARKVSG QPPGIVGSPS 420 SAESAALTKK IQGKRGKVGR VRRGNAGIQA ETPMKVRKRA RVK*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MVEERGDDKV RWGTWEELIL GGAVLRHGSH NWDAVASELQ TRSLYPYFFT PRAKTMSLAA  60
SSFLLLCQSC GDGGTSIVVA VNVKVCKAKF KVLQECYSDC SAWFEELRKK RVNELRRELE  120
KSEESIGSLE TKLETLKSEK AVCSYADLGC SAAESLEPLV KSGENESSGK DVSRDGSSAG  180
SFTQETRENS IPQCQAAATE ASVEKRERKP VVLEPCIRLE KFPANEKVTK GNVQPVIAPD  240
ANVQNPCTSE QGMDEFVKIL DSIMENEHAS VFRRRLDSQK RARYKRIIRQ HMDLDTIRSR  300
IANKSITSII ELLRDLLLLA NNALVFYSKC TREYKCALVF RDLVTKTLHQ HYKVTGNKFG  360
AAETPNTPMH KPTAKPRSAR PFNSKILNQP VIAVNNAQGT SIVVARKVSG QPPGIVGSPS  420
SAESAALTKK IQGKRGKVGR VRRGNAGIQA ETPMKVRKRA RVK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	3e-17	MYB_related family protein