PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014349-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 539aa MW: 56426.4 Da PI: 7.2698

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014349-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.2	2.4e-10	123	168	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 r++W++eEd+ l+ av+++G g+W++I + +R + q+ rw+ AUR62014349-RA 123 RKPWSEEEDLELITAVQKFGEGSWAAILKGEFkGNRNATQLAQRWN 168 789**********************98655579*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MVDATEIKLK KVAVTEEDVC TLLQRYSATT VLSLLREVAQ FPEDDDSDLE YELEARPPVS 60 NEAATEALNC VKVLASGSAI ESSIPNGSSV EGRTLNINSS HEASGNFGEG LDANGLPINR 120 KRRKPWSEEE DLELITAVQK FGEGSWAAIL KGEFKGNRNA TQLAQRWNII RKKQGSLNIG 180 GAKIASPQPT EAQLATRRAL DMAFKDKLST GCSTVGNEPA VTTSPKISGS KTDLTITGAS 240 VPSSQPQSSP VTCVTSSVPK AQPQKKVTQP SVSTDSIQAT AVAAGARIVS PSAAASMFKA 300 VQSKKAMHIR GDDSLIKTSA VGCSSPLPPN VHFIRTGLSS TPTFTASAGT ASCVAGQQAK 360 GNGAIKPPVP PAAVSQLPKA RTPSAVGLER TTATQQMENR TSTAVDVQGS DTKLTRVQED 420 NASHPQCLPD SSLDKCRATS TVADVGLSKC MVNIGSSQSA NVARNEVKDD ACKQIFEGSA 480 LKSDNEKLSA VQNLQSGTSG VEGTPEVPPS RIVDEGAEKM EVSKEVLVSV KISNQTNL*

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MVDATEIKLK KVAVTEEDVC TLLQRYSATT VLSLLREVAQ FPEDDDSDLE YELEARPPVS  60
NEAATEALNC VKVLASGSAI ESSIPNGSSV EGRTLNINSS HEASGNFGEG LDANGLPINR  120
KRRKPWSEEE DLELITAVQK FGEGSWAAIL KGEFKGNRNA TQLAQRWNII RKKQGSLNIG  180
GAKIASPQPT EAQLATRRAL DMAFKDKLST GCSTVGNEPA VTTSPKISGS KTDLTITGAS  240
VPSSQPQSSP VTCVTSSVPK AQPQKKVTQP SVSTDSIQAT AVAAGARIVS PSAAASMFKA  300
VQSKKAMHIR GDDSLIKTSA VGCSSPLPPN VHFIRTGLSS TPTFTASAGT ASCVAGQQAK  360
GNGAIKPPVP PAAVSQLPKA RTPSAVGLER TTATQQMENR TSTAVDVQGS DTKLTRVQED  420
NASHPQCLPD SSLDKCRATS TVADVGLSKC MVNIGSSQSA NVARNEVKDD ACKQIFEGSA  480
LKSDNEKLSA VQNLQSGTSG VEGTPEVPPS RIVDEGAEKM EVSKEVLVSV KISNQTNL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	3e-27	MYB_related family protein