PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62013714-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 242aa MW: 27121.3 Da PI: 5.8941 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.7 | 3e-09 | 4 | 32 | 14 | 44 |
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrw 44 ++ ++G++ W++Ia +m gRt++++k++w AUR62013714-RA 4 ELQGEFGNK-WAKIATYMA-GRTDNDVKNFW 32 566689***.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MVIELQGEFG NKWAKIATYM AGRTDNDVKN FWSSRQKRLA RLLHSQSPTR IKKKHKSSAS 60 TSKDRPHFRE VSKNSSMEGE SSSKAQSLNS SSNSSKGKNS MELIPFPGSI DHSCPCFEAN 120 NATCLDPIPL NTYYNHTDLQ LLEMPSFPSI PPFQTDFPFL PETQELIDRL DYSFFAPFGY 180 INEPALINDG VHLFSCFGGG GMNGETRVKR EDNHAAPDSF FDDFPSDVFD EIEPLPSPPR 240 W* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 4e-21 | MYB family protein |