PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012478-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 300aa    MW: 33788.8 Da    PI: 6.7738
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012478-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30148207159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C+ a +Cpvkkkv+rsa+dp++++ tYegeHnh+
  AUR62012478-RA 148 VKDGYQWRKYGQKVTRDNPSPRAYYKCANApECPVKKKVQRSADDPTILVATYEGEHNHP 207
                     58**************************999****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESSSNWVLD TSLGFNLNLN LCNTPEIDNK IHEDERKSGS LEEELNRMNN ENKRLTKLLA  60
SMCENYSALQ NQLMGLISPS SKGENEQDQN PRKRKFFEAT DCGIQGNTEQ SCISYDDSLK  120
RVRLLSSKPK ITNKMLIRTD LSDTSLIVKD GYQWRKYGQK VTRDNPSPRA YYKCANAPEC  180
PVKKKVQRSA DDPTILVATY EGEHNHPQPY SRDHLDQHVV LSSNQSVNDK AVIQSPSNLP  240
TLNLDLINHN YSNNTEKALQ RLLVDQMASS LTKDPSFTSA LAAAISGKVS ENNYCEQWL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-68WRKY family protein