PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012386-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 177aa    MW: 19977.6 Da    PI: 8.8253
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012386-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-20656155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr++  +g+Wv+eIr+p        kr++lg+f taeeAa+a+++a+  ++g
  AUR62012386-RA  6 KKFRGVRQRQ-WGSWVSEIRHP-----LlkKRVWLGTFETAEEAARAYDQAAILMNG 56
                    59*****999.**********8.....335**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MVLPSKKFRG VRQRQWGSWV SEIRHPLLKK RVWLGTFETA EEAARAYDQA AILMNGQNAK  60
TNFPRDKNHY SSSKSNTTND QEKIPPFNSA LSEILSAKLK KYCKDPSPSL TCLRLDTDNS  120
HIGVWQKRAG TCSSSSWVMR VELEAGGDDN MTEEDKAALQ MIEELLNWNP PTSYLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.11e-63ERF family protein