PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62011530-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 20394.3 Da PI: 10.5893 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.1e-17 | 8 | 56 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g WvAeIr+p +r++lg+f +aeeAa+ +++a+ + AUR62011530-RA 8 KKFRGVRQRH-WGAWVAEIRHP-----LlkRRIWLGTFKSAEEAARTYDEAAVLM 56 59*******9.**********8.....334*********************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MGLLQSTKKF RGVRQRHWGA WVAEIRHPLL KRRIWLGTFK SAEEAARTYD EAAVLMSGRK 60 AKTNFPVTTK ISGSSNEVTS RPSKEPLSKS YPNSVSSLLN SKLRKSYQKL CPSLTCLRLD 120 TENSNIGVWQ KRSIGGQSNS SWVMTVKFDA KNNVEAQETK GGISEEEKVA LQMIEELLNK 180 Y* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 8e-64 | ERF family protein |