PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010924-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 291aa    MW: 31492.4 Da    PI: 4.4623
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010924-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-1854104155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  AUR62010924-RA  54 PVYRGVRRRA-WGKWVSEIREPRK---KSRIWLGTFSSPEMAARAHDVAALSIKG 104
                     68*****777.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MAPKYDQNTY QENSSDTSST YNDEAMAINV DEKESNNSSS GSNSKRRQRD TKHPVYRGVR  60
RRAWGKWVSE IREPRKKSRI WLGTFSSPEM AARAHDVAAL SIKGSSAVLN FPDLAPSLPR  120
PLSNSPRDVQ LAAAKAAALE FNXXXXXXXX XXXEDNGSFS SSSSSTAAAP AGATTQEHAT  180
NSSSAATTDV APASPSTSSS TTALSSDSTA VSGDEEQLLG EIVELPTLED ESGFDLAEFV  240
DRTWLMYEYC DSDPLLQCWV NNGNTSATEG YFGEQGLSYN TSFDALLWHH *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.19e-39ERF family protein