PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62010573-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 166aa MW: 18915.6 Da PI: 9.1535 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.4 | 2.9e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+s rqvtfskRrng+lKKA+ELSvLCdaeva+iifs+tgklye++s AUR62010573-RA 9 KRIENDSSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPTGKLYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 57.8 | 4.8e-20 | 59 | 123 | 34 | 98 |
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + R+llG++Le +s+ eLq+Le+qL+ksl++iR+kKn l++e+i++l + ek l +en +L++kl AUR62010573-RA 59 SSRKLLGDGLEACSIDELQELEKQLDKSLSNIRAKKNALFREKIDKLYEEEKLLLKENARLKEKL 123 56************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MVRGKTQMKR IENDSSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP TGKLYEFASS 60 RKLLGDGLEA CSIDELQELE KQLDKSLSNI RAKKNALFRE KIDKLYEEEK LLLKENARLK 120 EKLHVSSPDS QRSRQTADDQ QNSAQDVETE LFIGLPESRN TRLLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-46 | MIKC_MADS family protein |