PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62010428-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | SRS | ||||||||
Protein Properties | Length: 144aa MW: 15336.9 Da PI: 6.4071 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 75.7 | 1.3e-23 | 23 | 80 | 96 | 153 |
DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++ le ++P+ev+s+a frc+rvss d+ +++aYqt+++igGhvfkG+LydqG+ AUR62010428-RA 23 TSAGLEGGNFPAEVNSSATFRCIRVSSEDNVVDQYAYQTSITIGGHVFKGVLYDQGPT 80 345667778***********************************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 144 aa Download sequence |
MDHYNQYLPL PLSLSNIHHH SPTSAGLEGG NFPAEVNSSA TFRCIRVSSE DNVVDQYAYQ 60 TSITIGGHVF KGVLYDQGPT TARRGGEASS IATSDHHPFN ITGTATSMAA GTHPNIYHPA 120 SLYSAPSFNA FLPVCSTNKI ELD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66350.1 | 9e-24 | SRS family protein |