PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009626-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 183aa    MW: 21032.8 Da    PI: 4.9504
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009626-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.5e-17855148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++lv+ v ++G ++W+ Ia+  g++Rt+k+c++rw +yl
   AUR62009626-RA  8 KGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 55
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MVQEEIRKGP WTEQEDLQLV CFVGLFGDRR WDFIAKVSGL KRTGKSCRLR WVNYLHPGLK  60
RGKMTPHEEK LVLELHSQWG NSTVVPDTSA LQGKKFQKDE SGEEEIYSMD DIWKDITSEE  120
PIKPVLDGYR EGSNFSCSTM VSPLWEYCPD TLWRMDVDES KMFSSPDQFV PSCQQKNMSL  180
TG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.31e-57MYB family protein