PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62009286-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24061.3 Da PI: 5.1087 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.4e-18 | 50 | 101 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++++ge AUR62009286-RA 50 PVYRGVRMRT-WGKWVSEIREPKK---KSRIWLGTFPNPEMAARAHDVAALSIKGE 101 68*****998.**********854...6************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MMEIQIPINS NINNNRSGSS IRDDTTTTSI PNLDPVKTPK RARDSGGKHP VYRGVRMRTW 60 GKWVSEIREP KKKSRIWLGT FPNPEMAARA HDVAALSIKG ESAILNFPEL AGLLPRPVSQ 120 SPRDVQAAAA KAAAMENIHS MEIGNSDELS EIVELPSLGP VGNSGEMMGR ELVYDFDSGD 180 NNGWIYHNPP WMMQCMEDFV VVPENVISTT FEGLLWD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 5e-56 | ERF family protein |