PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008894-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 719aa    MW: 79116.6 Da    PI: 4.7286
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008894-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.18.9e-20576673296
                     EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                     +kvl++sdv+++gr+vlpkk ae+h  +++ + ++ + +ed  ++r+W++++++  ++ks++y+l+ ++ +Fv++ngL+egDf+v++  ++ +++
  AUR62008894-RA 576 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGIPIAMEDiGTSRVWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--SDvKCG 667
                     79*************************999999999*****7778*******99777777777777.********************..566999 PP

                     ..EEEE CS
              B3  91 elvvkv 96 
                     +++++ 
  AUR62008894-RA 668 KYMIRG 673
                     888765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MGLKKELVMH GEDLQNFDVV AGEGIKDSEE EIWFETASHP FESNNNDENK DANMSNENDF  60
LDVDVSDPSS LFYADFPPLP EFPCMXXXXX XXXTPVATVA PKPLGVCSTA TTSSSASTAS  120
SGAASWAVLK SDADQDPEPV TDHDLVQRVE EREILMDDVD HCMDMMQNFG CIDMLENTDI  180
CWDPSPLFED NNGDENECSQ YQFLQPEEVL VNRQIVDEDE EERVFEHGVV SGGMGGQNSG  240
EPGSSTDDLA LVFFEWLKSN KEAISAEDLR NIKIKKSTIE NAAKRLGGGK EGMKQLLKLI  300
LQWVQNHHLQ NKKMMMSGED NEFHAVNTDH KNENATTSDT SAANPSCAPE SQCFRLTTWL  360
PAPPPPQSYV SESPVMVPMT APPPPPGFPP TIGYMGGDPY GGGNPTAAYP PMPPSDYHTW  420
GPTPMQYGMS PHYGGYPDAA APFGGYPNPP PYPGFYYHPG PTEGLVRLGS SATKEARKKR  480
MARQRSQMAE QQHAAAVVGN GNCGVVAPHG NWVYWPPPPP PQVVAPQQVN HPGPMVGQMM  540
PPQPPIERAA NGYQKQVGIE KKQGWKTEKN LRFLLQKVLK QSDVGNLGRI VLPKKEAETH  600
LPELEARDGI PIAMEDIGTS RVWNMRYRFW PNNKSRMYLL ENTGDFVRSN GLQEGDFIVI  660
YSDVKCGKYM IRGVKVRPQQ QSAKPELTNK KSNKTQKTEP TSSPAGNGPS SSPTVTQS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.11e-129B3 family protein