PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008413-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 136aa    MW: 15401 Da    PI: 8.677
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008413-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.21.2e-101451148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g          ++R+ k+c++rw +yl
   AUR62008413-RA 14 KGPWTPEEDIILVSYIQEHGPG----------LRRCSKSCRLRWTNYL 51
                     79******************99..........78************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGLRRCS KSCRLRWTNY LRPGIKRGNF  60
TEQEEKMIIH LQALLGNREC LVTGYSDSDY AADVDTRRSV TGYVFTLGGS VMMMLHFFML  120
RLYCSVFIIC SSKLP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.11e-52MYB family protein