PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008146-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family E2F/DP
Protein Properties Length: 368aa    MW: 40009.5 Da    PI: 5.2677
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008146-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP581.6e-18971542971
         E2F_TDP  29 evakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      va+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+w+g
  AUR62008146-RA  97 LVADELVAEyadasnalgtnenqgyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWRG 154
                     699999999999*************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MVTGNSQEDG EKNPKGATRS WGPAVSGQSV STSGSVGSPS SRSEAGMATP ARDSTVLRLS  60
HLEIHGDDSV SQGAVVRGLK APVILIDVGS DRNFSDLVAD ELVAEYADAS NALGTNENQG  120
YDEKNIRRRV YDALNVLMAM DIISKDKKEI QWRGLPRTSL NDIEELKTER VGLRNRIEKK  180
AAYLRELEEQ FVGYQNLIQR NQQLFGDGNA PTGGVALPFI LVQTRPNATV EVEISEDMQL  240
VHFDFNSTPF ELHDDNYVLK QMNVSNKSLF DGEACDTPAN AGEGPSVPAT YHPQISQPPS  300
PKTYHNESSQ LPSPPKPYQP QTCTSPTSAN TQQAQMTLPS SRPNTAMKSP TSPPLPGILK  360
ARVQHDR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.22e-98E2F/DP family protein