PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007975-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 264aa    MW: 29072.8 Da    PI: 7.9797
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007975-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.7e-19124178256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tk+q   Lee F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  AUR62007975-RA 124 RKKLRLTKDQSALLEESFKQQSTLNPKQKQALADRLNLRPRQVEVWFQNRRARTK 178
                     78889************************************************98 PP
2HD-ZIP_I/II122.32.4e-39124212190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+rl+k+q++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +
  AUR62007975-RA 124 RKKLRLTKDQSALLEESFKQQSTLNPKQKQALADRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCETLTDENRRLQKELQELK-T 212
                     69*************************************************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MVSPSDNQEQ TLTLGLGFSS ISSAKTKNPI SGPGTKSCDH EPSLTLSLSG ETYQTTTAVA  60
AIERKVFVDQ EPPCSVSVAS SLSNVVSVKR ERESASSDDL ELERGSSRIS DEEEDGCGPT  120
NTPRKKLRLT KDQSALLEES FKQQSTLNPK QKQALADRLN LRPRQVEVWF QNRRARTKLK  180
QTEVDCEYLK KCCETLTDEN RRLQKELQEL KTLKLGQPFY MHLPAATLTM CPSCERIGAG  240
VPTIPGTPTT NSTPASKTHF TLGP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173181RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.15e-69HD-ZIP family protein