PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62007937-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | C2H2 | ||||||||
Protein Properties | Length: 173aa MW: 18508.6 Da PI: 10.0144 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.6 | 2.2e-05 | 121 | 143 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp+C+++F++ L H r+H AUR62007937-RA 121 HKCPYCPRVFKSGQALGGHKRSH 143 79*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MESDNSDNSN KLCNKRRTRS SLTRDSSGHK SCFNFTAESS DNNSVILEGG SSTNHVGILR 60 IKDTNSGYFE NGAKELESDD SVDGINDNNN FGKQNLVGVS SGKIMGTSAT TSSKSKKVKG 120 HKCPYCPRVF KSGQALGGHK RSHMMGAGRG VVKLEEKPRI TRQVTVSLAG CF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45120.1 | 2e-10 | C2H2 family protein |