PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62007117-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 114aa MW: 12772.6 Da PI: 9.9414 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41 | 4.4e-13 | 36 | 73 | 6 | 45 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 eE+ + v++ ++lG++ W+tIa+++ gRt++++k++w AUR62007117-RA 36 SEEERIVVELQARLGNK-WATIASHLT-GRTDNDVKNFWS 73 59***************.********9.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MDLETGAPFN PRAFFHELAN LVVFVGSTNS DPILKSEEER IVVELQARLG NKWATIASHL 60 TGRTDNDVKN FWSSRKKRLA RTLNSSLQPN KCLCLDQNKQ KSAAPPPQLP SKLE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 75 | 101 | RKKRLARTLNSSLQPNKCLCLDQNKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 1e-20 | MYB family protein |