PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62007058-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 191aa MW: 21886.2 Da PI: 5.369 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.3 | 2.7e-18 | 2 | 47 | 11 | 56 |
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 q++ Le++F +++ p ++++++A++lgL rqV++WFqNrRa+ k AUR62007058-RA 2 QIKSLESMFSSESRPGSKTKQRIADQLGLHPRQVSIWFQNRRARSK 47 99******************************************99 PP | |||||||
2 | HD-ZIP_I/II | 102.6 | 3.3e-33 | 2 | 85 | 10 | 93 |
HD-ZIP_I/II 10 qvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 q+k+LE++F++e++ ++ K+++a +Lgl+prqv +WFqnrRAR k+kq+E+dy+ Lk++yd+l+++ e+L+ke+++L+ e+++ AUR62007058-RA 2 QIKSLESMFSSESRPGSKTKQRIADQLGLHPRQVSIWFQNRRARSKSKQTERDYSILKACYDNLASKFEALKKENQSLTVEIQR 85 99*****************************************************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MQIKSLESMF SSESRPGSKT KQRIADQLGL HPRQVSIWFQ NRRARSKSKQ TERDYSILKA 60 CYDNLASKFE ALKKENQSLT VEIQRLRNLN EGPKDCTSDS APVTCSSNGE SISLSSQEKH 120 KAQPEDYIQD NILSKNRSEG FMSFEQETDS QFNMIESADD SLASFRNHDG LEPAYLMEHN 180 CISDWWEFWT * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 50 | RRARSKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61890.1 | 3e-40 | HD-ZIP family protein |