PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006532-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HB-other

Protein Properties

Length: 503aa MW: 56650.4 Da PI: 6.4501

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006532-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.6e-19	23	78	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++R+ t++ql++Le+++++++yp++++++eLA+++gLte+q++ WF+ rR k+k+ AUR62006532-RA 23 KRRRFKTPYQLQALEDFYNEHKYPTESMKAELAENIGLTEKQISGWFCHRRLKDKR 78 6777789***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MFNVSDSSEV QCEENKALPE KNKRRRFKTP YQLQALEDFY NEHKYPTESM KAELAENIGL 60 TEKQISGWFC HRRLKDKRII NGELNPPGRQ ELSSGVIQDR GSGLKQDSCS STKQGDYRLA 120 DLREVESRRF GNSDFPAAEI NYEQRVLDDG IEMDDTSSES NSALQGSFYP HKRSSLEVEA 180 TEYRAPNGFI AQNKRRVGPS GYLKIKGQTE NAAVTAVKRQ LGRQYQEDGP PLGIEFDPLP 240 PGAFESPSKN ANSDAYGVSV PVGSSSFDIG AIHKRPSLST IRNQDKFVAP ADYRSLHKTD 300 PDSFSYRQPK QKSTYPNQGR VFPAHKSSCV ASYSARESSD YDGSMNNSIL RKHGPSGMGS 360 DSYGGKFTSE PEEPWWNDYD NGNSVAVRSR ERLDSRSAAP IRNKDPIDKE DRVPPSRIMK 420 DEEFYAERRP IVNHHDSIRS KMSPNELRAV KRGREELLQE GYVAMRPSSQ EPPQWSRQIR 480 EPIEMPSSFS EDETAETSSS MD*

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MFNVSDSSEV QCEENKALPE KNKRRRFKTP YQLQALEDFY NEHKYPTESM KAELAENIGL  60
TEKQISGWFC HRRLKDKRII NGELNPPGRQ ELSSGVIQDR GSGLKQDSCS STKQGDYRLA  120
DLREVESRRF GNSDFPAAEI NYEQRVLDDG IEMDDTSSES NSALQGSFYP HKRSSLEVEA  180
TEYRAPNGFI AQNKRRVGPS GYLKIKGQTE NAAVTAVKRQ LGRQYQEDGP PLGIEFDPLP  240
PGAFESPSKN ANSDAYGVSV PVGSSSFDIG AIHKRPSLST IRNQDKFVAP ADYRSLHKTD  300
PDSFSYRQPK QKSTYPNQGR VFPAHKSSCV ASYSARESSD YDGSMNNSIL RKHGPSGMGS  360
DSYGGKFTSE PEEPWWNDYD NGNSVAVRSR ERLDSRSAAP IRNKDPIDKE DRVPPSRIMK  420
DEEFYAERRP IVNHHDSIRS KMSPNELRAV KRGREELLQE GYVAMRPSSQ EPPQWSRQIR  480
EPIEMPSSFS EDETAETSSS MD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-75	HB-other family protein