PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006150-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 563aa MW: 63293 Da PI: 6.4332

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006150-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	84.8	8.2e-27	134	189	2	54
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYeg 54 +DgynWrKYGqK++ g++fpr+YYrCt++ gC ++k+v+rs++dp+++++tY+g AUR62006150-RA 134 EDGYNWRKYGQKDILGANFPRAYYRCTHRvfqGCLATKQVQRSDDDPSFFDVTYRG 189 8*************************9999********************99 PP
2	WRKY	79.3	4.3e-25	355	415	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg+nWrKYGqK++ g++fpr+Y+rC ++ gC ++k v+r+++dp +++++Y+g H+++ AUR62006150-RA 355 EDGFNWRKYGQKDILGAKFPRAYFRCNQRtleGCFATKLVQRTEDDPAFFQVIYRGMHTCS 415 8***********************887777*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MGSNVNDLSP NSLVNVLVEG RDLTRELQLG LGNETHSSSN KAYGLMAKDI LAKFERSLQI 60 LQYDPMNQFQ FQLTTTATND SPNFFSGSPK SLDSDGEFRD PAEYKDDSKK RRVSPRITQR 120 VQGSTSSGLE GPIEDGYNWR KYGQKDILGA NFPRAYYRCT HRVFQGCLAT KQVQRSDDDP 180 SFFDVTYRGA LIQQNGVYPS STSAANSPTI ASELSFDNQE KGELVNELVE GRDLTKQLLL 240 MILNNEQPRS SSSNDDNDAY GLIAQKILAK FERSLQILQY DPSNNQSKSK LFQQTTTDSP 300 YSFSGSPKSQ DSENNADFKH PSDLKNDPKK LRRVVPQVTQ RVQGCTKNGL EGPIEDGFNW 360 RKYGQKDILG AKFPRAYFRC NQRTLEGCFA TKLVQRTEDD PAFFQVIYRG MHTCSKASSS 420 SFPTNPTQKP ESIEIIAYPP CQQSKDTMLI FEKDIKPFSS STLQTHQIPT TMPNYNTNNY 480 INLSFPTNTI TNTFQSPSCE ANMIDFNHRN ETVYNPQGAF VRGVTHPSSS SGTHYSDSAP 540 HLSFDQGEFD RDFFIDNPNY IQ*

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MGSNVNDLSP NSLVNVLVEG RDLTRELQLG LGNETHSSSN KAYGLMAKDI LAKFERSLQI  60
LQYDPMNQFQ FQLTTTATND SPNFFSGSPK SLDSDGEFRD PAEYKDDSKK RRVSPRITQR  120
VQGSTSSGLE GPIEDGYNWR KYGQKDILGA NFPRAYYRCT HRVFQGCLAT KQVQRSDDDP  180
SFFDVTYRGA LIQQNGVYPS STSAANSPTI ASELSFDNQE KGELVNELVE GRDLTKQLLL  240
MILNNEQPRS SSSNDDNDAY GLIAQKILAK FERSLQILQY DPSNNQSKSK LFQQTTTDSP  300
YSFSGSPKSQ DSENNADFKH PSDLKNDPKK LRRVVPQVTQ RVQGCTKNGL EGPIEDGFNW  360
RKYGQKDILG AKFPRAYFRC NQRTLEGCFA TKLVQRTEDD PAFFQVIYRG MHTCSKASSS  420
SFPTNPTQKP ESIEIIAYPP CQQSKDTMLI FEKDIKPFSS STLQTHQIPT TMPNYNTNNY  480
INLSFPTNTI TNTFQSPSCE ANMIDFNHRN ETVYNPQGAF VRGVTHPSSS SGTHYSDSAP  540
HLSFDQGEFD RDFFIDNPNY IQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	3e-34	WRKY family protein