PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005714-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 292aa    MW: 32024.7 Da    PI: 7.5498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005714-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.7e-2067116255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa a+++a++k++g
  AUR62005714-RA  67 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAAIAYDEAALKFKG 116
                     7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDWRDQKDMK AMVSALAQVM ASASDSDHSS FSQPHHSSSV PAHDASQHQP SQDQPTTAGE  60
GSGKKRHYRG VRQRPWGKWA AEIRDPKKAA RVWLGTFETA EAAAIAYDEA ALKFKGTKAK  120
LNFPERVIYG HPHYYMANNN QNQTSSTTAT AAATTTYSHG QAPSGMSSSI LSHQHHQDTT  180
SNTNIYPHLV QYAQLLSSND VNFPYFMTHL YPQTSANTND TTTSGNNYYY STSASQSSPL  240
SSTMTSAVNQ AVPPPRYEEW DFESFSTTSS SSSSHYCSSS SNYNKRPGPD I*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.17e-35ERF family protein