PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005183-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 297aa    MW: 34546.8 Da    PI: 10.0102
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005183-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.85.5e-2024113198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +p++++k  +l +p +f++++ +k  ++k+++l++++g++W+v l  +k +++ ++++GW+eFv  n +  g+f++F+++g+s f   vk
  AUR62005183-RA  24 FFKIYLPEHNSK--QLAIPPDFIRNFREK--TPKKVILKNLKGEVWNVDL--EKAGSKLLMKRGWEEFVTGNSVARGEFLIFTYKGNSVF--IVK 110
                     788886666665..59*******988766..6779***************..**********************************9999..999 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  AUR62005183-RA 111 IFS 113
                     997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MARPAKRKRG RPRKYPVPQY PPEFFKIYLP EHNSKQLAIP PDFIRNFREK TPKKVILKNL  60
KGEVWNVDLE KAGSKLLMKR GWEEFVTGNS VARGEFLIFT YKGNSVFIVK IFSISGCLKE  120
DEPMGTNDQP HVTLKQEPNF DESYSHHTDV CSENTYLERS AKVEQMSQDS HKVMTRGVSE  180
GNLDLKRIRF TSVNKGKIYE LNIPAGIFTE YNIERPKPNR PEMVLLKYPR GISQTVKIWR  240
EHDCVQITTG WREFQLKNKL TEGDECDFEV SLGEGRKIKE IELLQIRRRT PITRMI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.14e-21B3 family protein