PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62004911-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 292aa MW: 33548.1 Da PI: 5.9347 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 52.1 | 1.1e-16 | 86 | 132 | 10 | 56 |
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 e +++Le++Fe +++++ +++ ++A+ +gL+ rqV +WFqNrRa+++ AUR62004911-RA 86 EKVKALEKHFEVENKLQPDRKVKIAEDVGLEPRQVAIWFQNRRARWR 132 6789******************************************9 PP | |||||||
2 | HD-ZIP_I/II | 112.1 | 3.7e-36 | 79 | 170 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk rl e+vk+LE++Fe e+kL+p+rKv++a+++gl+prqva+WFqnrRAR+++kqlE++y L+++ydalk++ +Le+e+ +L +l++ AUR62004911-RA 79 KKSRLCLEKVKALEKHFEVENKLQPDRKVKIAEDVGLEPRQVAIWFQNRRARWRAKQLEREYGDLRASYDALKHDYGSLEQEKVDLLGQLND 170 99***********************************************************************************9988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MLSEMPEVTK LHPVPDAFVP VMRFKFNGVS IDLLYAKLSH LSFYIACDKK KALYSEDFQA 60 MLERLEEEDN ADTSRQLMKK SRLCLEKVKA LEKHFEVENK LQPDRKVKIA EDVGLEPRQV 120 AIWFQNRRAR WRAKQLEREY GDLRASYDAL KHDYGSLEQE KVDLLGQLND LRSKIETRKS 180 EMKTTNTTLS NPITINSTDI MNEGTCMNVP LQASPTPSCR TLDPYDMPSS TMTATTLSLD 240 GLQLCKAYQD HITKMEEMGV HNMNNDISGS FFSVDQVPTL HYWYNNSDQF N* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65310.2 | 2e-40 | HD-ZIP family protein |