PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62004822-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | G2-like | ||||||||
Protein Properties | Length: 424aa MW: 46788.1 Da PI: 5.0828 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.1 | 2.3e-34 | 253 | 307 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fv+av+qLGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ AUR62004822-RA 253 KARMRWTPELHESFVDAVNQLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 307 68****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 57.8 | 2.5e-18 | 255 | 306 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +vdav+qlGg t+k + + m+ +g+t +++ks++qky+ AUR62004822-RA 255 RMRWTPELHESFVDAVNQLGGSeraTPKGVLKLMNvEGLTIYHVKSHLQKYR 306 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MEMNMRSALP MQTSSGNCYN ELKVPGSYTS PLPVLANPLE DFPKSPDPFF VSSSREMIAS 60 PLQMQADPVV SHIGSSSSAS PFVGGFPADL HLPSFTPSER LPQNSPFISQ SVGGGANYPP 120 NHGTVSDFQL TGFINYQKDD DDNSWNSGHL QDLLDLPEGV SIVNGQVGNS TEVMSSENHL 180 KRIGWREMDL YADSIEPNWN ELLADSNTLD QQPKVSQSST DTVVPQPQTQ QQHPLPSREA 240 SVSANPTSSS QNKARMRWTP ELHESFVDAV NQLGGSERAT PKGVLKLMNV EGLTIYHVKS 300 HLQKYRTARV RPESPERDLE KKSGSIEQVS SVDLKTSVTI TEALRMQMEV QKQLHEQLEI 360 QRKLQLQIEE QGKYLLQMLE NQNKAEKEKT KSPPKDKSEA SATEAGGSDS PPLKRSRTDD 420 SVY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04450.2 | 1e-76 | G2-like family protein |