PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62004723-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 27433.3 Da PI: 6.5122 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 32 | 82 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g AUR62004723-RA 32 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 82 59*****998.**********9...336************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MVKSEVKIQS EASKAMSSLS PKSQPSSSSL KKKYKGVRMR SWGSWVSEIR APNQKTRIWL 60 GSYSTPEAAA RAYDAALLCL KGSSANLNFP HTAYSTTSPL IPATNAAVAT VMSPKSIQRV 120 AAAAAAATNX XXXXXXXXXD EHTTQAHPST SSSHSSMTSS PSQSSSPPPS DQLIDDIISL 180 ADDPYHPTFD DINNAASSMV MMNNDYPWFD LSPKHLDPVM MNSMFFNPPS MNMMDIEQLY 240 DDGDIPLWSF R* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77640.1 | 2e-30 | ERF family protein |