PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004545-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 458aa MW: 50638.3 Da PI: 6.7808

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004545-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.7	4.4e-13	285	330	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ++Er+RR+++Ns+f Lr ++P+ +++Ka+ L Av YI++L AUR62004545-RA 285 NHVKAERQRREKMNSRFYALRAVVPTV-----SRMDKASLLADAVSYINEL 330 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MDENMVFSSS SSSSLISPSP QTLKQQLEFL LQNQQHCWNY AIFWQTCTNN NNNVVNPSCS 60 LSLIWGEGHF QGINSPTTRP KKKPNLIHSD DFDDGGSTMD DVVTDAEWFY MTSPSKSYPF 120 KQRASGCGSS GTLAKAFTTG SLVWLSGPHS LRLYNCERAK EAHSHGLHTL VCIPVPNGVL 180 ELGSVEVIEE NWALIQQVHS LFGPLSNFDI GPTKPELSLG GGDDISFYDS GLVGAFNTNQ 240 AQPASFMGPS EEYDDSDEPI SRQRVARKRG RRPGSAREGQ VAVVNHVKAE RQRREKMNSR 300 FYALRAVVPT VSRMDKASLL ADAVSYINEL KEKVNVLESQ LEMMKVDCNM FSSITNDNGL 360 CSPSGISCNN NKFNSKIPLE MDVRVLGNEA MIRVQCENVN HPAARLMNAF KQLKLQVHHA 420 SVSTVEEMML QDVVIVKVPQ DLKSNAILKA AIFSRMQ*

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MDENMVFSSS SSSSLISPSP QTLKQQLEFL LQNQQHCWNY AIFWQTCTNN NNNVVNPSCS  60
LSLIWGEGHF QGINSPTTRP KKKPNLIHSD DFDDGGSTMD DVVTDAEWFY MTSPSKSYPF  120
KQRASGCGSS GTLAKAFTTG SLVWLSGPHS LRLYNCERAK EAHSHGLHTL VCIPVPNGVL  180
ELGSVEVIEE NWALIQQVHS LFGPLSNFDI GPTKPELSLG GGDDISFYDS GLVGAFNTNQ  240
AQPASFMGPS EEYDDSDEPI SRQRVARKRG RRPGSAREGQ VAVVNHVKAE RQRREKMNSR  300
FYALRAVVPT VSRMDKASLL ADAVSYINEL KEKVNVLESQ LEMMKVDCNM FSSITNDNGL  360
CSPSGISCNN NKFNSKIPLE MDVRVLGNEA MIRVQCENVN HPAARLMNAF KQLKLQVHHA  420
SVSTVEEMML QDVVIVKVPQ DLKSNAILKA AIFSRMQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-65	bHLH family protein