PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004449-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 263aa    MW: 29791.9 Da    PI: 4.3897
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004449-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-1975125256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +gr++AeIrdp++   r+r++lg+f+taeeAa  +++a+++l+g+
  AUR62004449-RA  75 KYRGVRQRP-WGRYAAEIRDPVK---RARVWLGTFDTAEEAAVIYDKAALRLRGP 125
                     8********.**********755...5**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MTNKRVRDDD ATDSSGDEED GPTCRTRVVK HVFEIRFQIT LPEIPAQPVA QAQAQPQPRK  60
QRKSGKRVQN ENTRKYRGVR QRPWGRYAAE IRDPVKRARV WLGTFDTAEE AAVIYDKAAL  120
RLRGPLAQTN FHRPPFSESG VTSLSDEFEE EDEVGQRLCS PTSVLRCHQG GDDVEERENG  180
KMIEIGDQVM SLPVNESEME LDISWFLNGL FSYDDAPKTI LDDCNVVPDY TSFDHGDLED  240
FSGDFDLDGP DFLKCEVDDY LL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-34ERF family protein