PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004131-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 269aa    MW: 26920.7 Da    PI: 8.1359
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004131-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-18154202456
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     kGVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++ge
  AUR62004131-RA 154 KGVRKRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGE 202
                     9***888.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEKRFDVFLW WLVFLGFCHH ISLVIGIIDA RMLEDHKNID FERKDNAQNG ITKTSYTMHS  60
AYGGDPKPSY GGGGDGYGGG GGGGGGFRGG SGGGFGGGGG FGGGCGGNCG GGCPGGCGGG  120
GGGFGAGGGF DGSGGSGMGD GGHGYGGGVG SGGKGVRKRS WGKWVSEIRE PRKKSRIWLG  180
TYPTAEMAAR AHDVAALAIK GENAFLNFPQ LAHLLPRPAS TCPKDIQAAA AKAAEAELSR  240
PLASSSSSSS TTTNLSSSSS EEANNIEW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60490.18e-40ERF family protein