PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62004127-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 244aa MW: 27219.4 Da PI: 6.1589 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.6 | 1.4e-08 | 4 | 32 | 14 | 44 |
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrw 44 ++ ++G++ W++Ia ++ gRt++++k++w AUR62004127-RA 4 ELQGEFGNK-WAKIATYLA-GRTDNDVKNFW 32 566689***.*********.*********** PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 244 aa Download sequence |
MVIELQGEFG NKWAKIATYL AGRTDNDVKN FWSSRQKRLA RLLHSQSPTR PNKKHKSSAS 60 SSKDRPHFRE VSKNSSMEGE SSSKAQSLNS SSNSSTGKKT MELIPFPGSV NHSCPCFEAK 120 SATYLDPIPL NTYCNHTDLQ LLEMPSFPSI PLPPFQTDFP FLPETQELID RLDYSFFAPF 180 GYINEPALIN DGVHFFSCFG GGGVSGETRV KREDNHVAPD SFFDDFASDV FDEIEPLPSP 240 PRW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G60460.1 | 2e-21 | MYB family protein |