PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004009-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 393aa    MW: 44162.3 Da    PI: 5.5138
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004009-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.72.1e-103183913374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lLle+A+avs++d+++ +++L+ l+el sp+gd  q+la+yft+AL +r+++s++++y+ +++ ++++ + +++ ++l  f+evsP+ +f+h++
  AUR62004009-RA  18 NLLLEAARAVSDSDTARLHQILWMLNELGSPYGDVEQKLASYFTQALFTRMTDSGDRCYNNMRVAADKSFSFETNRKMLLKFQEVSPWTTFGHVA 112
                     79************************************************************9999997666666666666************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvak.rledle 190
                      N a+ +a++ge ++HiiD++ + ++QWp+Ll+aLa+R +++p+l++T+v +++ +  ++ ++e+g rL+kfA+ +gvpf+f+v+++  +l++l+
  AUR62004009-RA 113 SNGALIDALDGEPKLHIIDISNTFCTQWPTLLEALATRMDDTPHLKLTTVLDSNDVgVQRVMKEIGVRLEKFARLMGVPFKFKVIHHVgDLSTLD 207
                     **************************************************9977778999************************96666****** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseeri 283
                     +++L+vk++Eala+nlv +lh+l      l+  rd +L+++k+l+P+vv+vve+ead   ++e F+++f+e+l+++ + f++le++++r+s+e+ 
  AUR62004009-RA 208 FSDLDVKEDEALAINLVNSLHTLS-----LRR-RDGLLSAFKGLNPRVVTVVEEEADFaaEEEGFVRGFSECLRWFRVYFEALEESFGRTSNEKL 296
                     **********************97.....555.99********************999767889******************************* PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve......eesgslvlgWkdrpLvsvSa 372
                     ++Er+  gr++v+++ac ++ + er+e++ +W  r++ +GF+ v++se++ +++++llr++k +g+++       +  + ++l W+d+p+v++Sa
  AUR62004009-RA 297 MLERA-AGRALVDLLACPEDTSAERRENATRWTGRMRGVGFGHVAYSEEVCDDVRALLRRYK-EGWSMAqcsslaSPTAGIFLNWRDQPVVWASA 389
                     *****.********************************************************.7766653333334599999************* PP

            GRAS 373 Wr 374
                     W+
  AUR62004009-RA 390 WK 391
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MAEIGGRMGG KECKWANNLL LEAARAVSDS DTARLHQILW MLNELGSPYG DVEQKLASYF  60
TQALFTRMTD SGDRCYNNMR VAADKSFSFE TNRKMLLKFQ EVSPWTTFGH VASNGALIDA  120
LDGEPKLHII DISNTFCTQW PTLLEALATR MDDTPHLKLT TVLDSNDVGV QRVMKEIGVR  180
LEKFARLMGV PFKFKVIHHV GDLSTLDFSD LDVKEDEALA INLVNSLHTL SLRRRDGLLS  240
AFKGLNPRVV TVVEEEADFA AEEEGFVRGF SECLRWFRVY FEALEESFGR TSNEKLMLER  300
AAGRALVDLL ACPEDTSAER RENATRWTGR MRGVGFGHVA YSEEVCDDVR ALLRRYKEGW  360
SMAQCSSLAS PTAGIFLNWR DQPVVWASAW KP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-179GRAS family protein