PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003876-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 258aa    MW: 28725.5 Da    PI: 4.8512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003876-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-19117166255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     +   r++lg+f tae+Aa+ +++a+ +++g
  AUR62003876-RA 117 KFRGVRQRP-WGKWAAEIRDP-----HraVRVWLGTFETAEDAAREYDRAAVRFRG 166
                     89*******.**********7.....338************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MEAESSQYYV YNDRPQSWQL SPEQEMNVMV SALRNVIAGG RGSSVGGSGN QNPSNDGSRL  60
VLEALQQNQN TSTSSPPASA TSLNFPPNFE NSNNGRTANT SGGNGGPRRR RKYKRNKFRG  120
VRQRPWGKWA AEIRDPHRAV RVWLGTFETA EDAAREYDRA AVRFRGPRAK LNFPLTDYPQ  180
ELEEQQNLXX XXXXXQEVDN NSGNQQQQQV VAGMSIDDDN ASPTNQEPET SGFVQITDGT  240
EISNWVDDMI DNIPPFQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.16e-22ERF family protein