PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003318-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 476aa    MW: 54121.8 Da    PI: 7.3383
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003318-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32.1e-11377465396
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      v+ ps+v ++  l+++k+   + ++   ++++++l+  + ++W+ ++  + +s+ + l +GWk Fv +n+L+e D++vF  +g+++++lv+ v
  AUR62003318-RA 377 EVMRPSSVRRRFFLSFSKDWKIRRKLR--NDQEVILRV-KEKTWTCTF--SLSSNNVGLLSGWKYFVPDNKLEEDDVCVFVPVGEQNKTLVLDV 465
                     578899999999999999985555555..455677665.88*******..8999999999*********************9998777777655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MLPKKFADHM RTHLPEKVAL KVNGVTWDVN LEKEKNDVLI FDQANLCEKE ASYFVKKGLQ  60
PNSDGSDDSG GEAKETSAEE VPDKNQGDDD SVDTLGSKRR KNHDEKSEKP IPKRQKSYGL  120
TYISNRRPVT DAEKEKALEK ARDTSKQYLN SFIVVMRPSC VYRRFFFSIP KEWEPTYVFK  180
KGEEVILRVK DKTWVCTFNC SRYTGGFEGG WKRFAVENFL EEFVVCLFFP VVGSNVGKSV  240
LDVSIFRVTP VVVQPTPVTT SNVDVQEISS EDGSLGDDDS DYASRNRKRR NNSGATPRGH  300
YSGSNAHKKG LCEDEGDESS DEEMTSTDED TGKTTPGENR TFCESSVRQA TEAEKNQALK  360
KARIAAAQYK YQYPLIEVMR PSSVRRRFFL SFSKDWKIRR KLRNDQEVIL RVKEKTWTCT  420
FSLSSNNVGL LSGWKYFVPD NKLEEDDVCV FVPVGEQNKT LVLDVIIFRA RPEID*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1397403KIRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-18B3 family protein