PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003264-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 339aa    MW: 38340.1 Da    PI: 4.7342
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003264-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.36.4e-1956109356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  AUR62003264-RA  56 KKRRLSVDQVKALERNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 109
                     566899***********************************************9 PP
2HD-ZIP_I/II129.61.3e-4155147193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk+++d+lk++ e+L++++++L +e+ke
  AUR62003264-RA  55 EKKRRLSVDQVKALERNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKASFDNLKQNYESLQHDKDALLKEIKE 147
                     69**************************************************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MKRISSSDSL GALISMCPPT DEHSPRNNIY SRDYQSMLDG FDEEGCIEET GHVPEKKRRL  60
SVDQVKALER NFEVENKLEP ERKVKLAQEL GLQPRQVAVW FQNRRARWKT KQLERDYGVL  120
KASFDNLKQN YESLQHDKDA LLKEIKELKS KLSEDNVSDS NTHIKEEALI FESDNDHNKK  180
DVELITPLDT LSGGDDGGSE DAKLLKVKNA FSEFKDGPSD SDSSAILNDD NNSNSPNASN  240
SSSDALFHHP QQQQLLMSPT SSFRFNCSSS PPPSINCFGF AAETRSDNLG TPQNQNNVYH  300
PQFVKIEEHN FFSGEEACNF FSEEQAPSLH WYCPDQWT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15685KKRRLSVDQVKALERNFEVENKLEPERKVK
2104112RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-59HD-ZIP family protein