PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002320-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 500aa MW: 57258.6 Da PI: 9.1126

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002320-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.6	4.2e-28	50	137	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k+++gkw++tk+++eH+H+l+p AUR62002320-RA 50 FYNTYATHVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KVVRQRAETRVGCRAMILVRKMNSGKWVITKCVKEHTHPLTP 137 ****************************************9988..999**********************************986 PP
2	FAR1	79.8	5.1e-25	338	426	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ + ++s+ +g+i r+f C+keg+ + + k + r++ra+tr +Cka++ vk +k+gkw+vt+++ +HnH+l+ AUR62002320-RA 338 FYDDYARKVGFVMRVMSCRRSEVDGRILARRFGCNKEGYCLSIRGKLGQVRKPRASTRGDCKAMILVKFDKSGKWVVTRFVRDHNHPLV 426 9*************************************9999999**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MGGSSVEGGQ SQDDKMNEEL SEKEVIPVGE PINEPFVGQE FESEAAAHAF YNTYATHVGF 60 VIRVSKLSRS RRDGTAIGRA LVCNKEGYRM PDKREKVVRQ RAETRVGCRA MILVRKMNSG 120 KWVITKCVKE HTHPLTPGKG RKDLIFEQYP VAIALKQARI DWSLFGKLAM KVWDFARSFN 180 FFKLAYVKKT VNENEHDKIR ELSQQLAVEK KRASTYKRHL EMVFEHIEEH NQSLSKKIQD 240 ITELLMLPLF DKENASLCNV DLALESPVKF EIKQKSHIPQ VFSKQTFTLF TKSFVESDEE 300 AGEFENSARE SSDIGVGDGV VEPNEGMEFD SEEAAKVFYD DYARKVGFVM RVMSCRRSEV 360 DGRILARRFG CNKEGYCLSI RGKLGQVRKP RASTRGDCKA MILVKFDKSG KWVVTRFVRD 420 HNHPLVVSLR EVRKKMDDKD KKIEELTAEL RNEKRLCTLY QEQLFAFMND VEGYNAQITK 480 KVQAVLINLK ETENQEPKP*

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MGGSSVEGGQ SQDDKMNEEL SEKEVIPVGE PINEPFVGQE FESEAAAHAF YNTYATHVGF  60
VIRVSKLSRS RRDGTAIGRA LVCNKEGYRM PDKREKVVRQ RAETRVGCRA MILVRKMNSG  120
KWVITKCVKE HTHPLTPGKG RKDLIFEQYP VAIALKQARI DWSLFGKLAM KVWDFARSFN  180
FFKLAYVKKT VNENEHDKIR ELSQQLAVEK KRASTYKRHL EMVFEHIEEH NQSLSKKIQD  240
ITELLMLPLF DKENASLCNV DLALESPVKF EIKQKSHIPQ VFSKQTFTLF TKSFVESDEE  300
AGEFENSARE SSDIGVGDGV VEPNEGMEFD SEEAAKVFYD DYARKVGFVM RVMSCRRSEV  360
DGRILARRFG CNKEGYCLSI RGKLGQVRKP RASTRGDCKA MILVKFDKSG KWVVTRFVRD  420
HNHPLVVSLR EVRKKMDDKD KKIEELTAEL RNEKRLCTLY QEQLFAFMND VEGYNAQITK  480
KVQAVLINLK ETENQEPKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-86	FAR1 family protein