PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002076-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 495aa MW: 54701.9 Da PI: 4.7312

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002076-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	78.9	8.4e-25	29	113	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sws ngnsfvv++ efak++Lpk+Fkh+nf+SF gF+kv+ ++ weF+++ F +g+k+ll++ AUR62002076-RA 29 FLSKTYDMVDDPSTDSVVSWSCNGNSFVVWNVPEFAKDLLPKFFKHNNFSSF-------GFRKVDPDR---------WEFANEGFLRGQKHLLKS 107 9************************************************9.......9*999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k AUR62002076-RA 108 ITRRKP 113 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGESSLTAAM AASNGNSNGS SSVNSPAPFL SKTYDMVDDP STDSVVSWSC NGNSFVVWNV 60 PEFAKDLLPK FFKHNNFSSF GFRKVDPDRW EFANEGFLRG QKHLLKSITR RKPVNAHPQQ 120 SSIQNTSVKS CVEVGKFGLE EEVERLKRDK NVLMQELVRL RQQQQTTDNQ LQSVGQRVQG 180 MEERQQQMMS FLAKAMQRPG FLAQIVQQQN ESNRHVTGGN KKRRLPNHDE EGGGTESMRT 240 DYSDGQVVKY QPLINEAAKS MVREILKLNG PLLDQSPKDP NNFLLDHVPS ASSVVDCGSS 300 STRTSGVILS EVAQCSKQSL IPEETGFSSN TTLNSEMHSS CPVGSDPAKE VRIPEIDLSS 360 SQEDALMSEL NQVLHPESSL KLPDLTFSVT QNPDVGFTDS LSTVQNGTLP KDSEEYSPSP 420 DLDVCLPGSN DVFWEQFFPM SPLGENIEEV DSSTPEAGIT RELEIGEDKG WEKLHHMNHL 480 TDQMGLLTAE MGRI*

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGESSLTAAM AASNGNSNGS SSVNSPAPFL SKTYDMVDDP STDSVVSWSC NGNSFVVWNV  60
PEFAKDLLPK FFKHNNFSSF GFRKVDPDRW EFANEGFLRG QKHLLKSITR RKPVNAHPQQ  120
SSIQNTSVKS CVEVGKFGLE EEVERLKRDK NVLMQELVRL RQQQQTTDNQ LQSVGQRVQG  180
MEERQQQMMS FLAKAMQRPG FLAQIVQQQN ESNRHVTGGN KKRRLPNHDE EGGGTESMRT  240
DYSDGQVVKY QPLINEAAKS MVREILKLNG PLLDQSPKDP NNFLLDHVPS ASSVVDCGSS  300
STRTSGVILS EVAQCSKQSL IPEETGFSSN TTLNSEMHSS CPVGSDPAKE VRIPEIDLSS  360
SQEDALMSEL NQVLHPESSL KLPDLTFSVT QNPDVGFTDS LSTVQNGTLP KDSEEYSPSP  420
DLDVCLPGSN DVFWEQFFPM SPLGENIEEV DSSTPEAGIT RELEIGEDKG WEKLHHMNHL  480
TDQMGLLTAE MGRI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02990.1	1e-111	HSF family protein