PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62001838-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 183aa MW: 21070.9 Da PI: 4.9503 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.1 | 3.5e-17 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl AUR62001838-RA 8 KGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 55 79********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
MVQEEIRKGP WTEQEDLQLV CFVGLFGDRR WDFIAKVSGL KRTGKSCRLR WVNYLHPGLK 60 RGKMTPHEEK LVLELHSQWG NSTVVPDTSA LQGKKYQKDE SGEEEIYSMD DIWKDITSEE 120 PIKPVLDGYR EGSNFSCSPM VSPLWEYCPD TLWRMDVDEC KMFSPPDQFV PSCQQKNMSL 180 TG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G59780.3 | 2e-58 | MYB family protein |