PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001611-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 826aa MW: 93172.7 Da PI: 7.7225

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001611-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.1	4.4e-16	63	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GFs+++ ++ + + + +t+r+fvC+keg +++ +C+a+lk+ ++ +kw vtk+ +eHnH+l AUR62001611-RA 63 FYDDYARRAGFSTKICQTGRFRPDSAVTSRQFVCTKEGLKRRP---------------SECEAMLKIDLK-GNKWAVTKFIKEHNHALE 135 9***********************************98774...............36******.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 826 aa Download sequence
MGVDIIDVEG GNMRIRASTD NGDAEAIGVE VSPTGVYVAQ DEVHVLEPHV GMEFESESAA 60 KTFYDDYARR AGFSTKICQT GRFRPDSAVT SRQFVCTKEG LKRRPSECEA MLKIDLKGNK 120 WAVTKFIKEH NHALESPSKL HSVRPHRHFP GAVKNVAEVY QAGVMVPSGV MYVTMDGNHV 180 SQTSVEANRL ARSISPVESS RLVKSSNCIN HAIKPATPKR TWGKDAQNML DYFKKMQAEN 240 PGFFYAIQLD EDNRMANAFW ADARSRTAYS HFGDVVTLDT SYKAAVSQEL PKSRHRISKW 300 HILREGQEKL AHVCHMHPNF QAELYNCVNL TETIEEFESS WDFIIDKYDL RRNDWLQSLY 360 NARRQWVPVY FRDTFFAAVS PNQGVKCSFF DGYVNQHTTL PMFFRQYERA MEYWFEKEIE 420 ADFDTISNTP VLSTPSPMEK QAADLYTRKI FTKFQDELVE TFVYTANRID GNGDTSTYRV 480 AKFEDDHKAY TVTLNISDMR ASCSCLMFEY SGILCRHILT VYTVTNVLTL PPHYILRRWT 540 RNAKSVVALD EPGANYAQES TPSRYNSLCR EAVKYAEEGA TASDTYTAAL TGLKEGAKKI 600 AAVKKIVAKV APQTPKKSTS GYDDKKISAA DSPLLWPRLD EVTRQFNLND SATLPHYVSG 660 MNLLRMAPAS VQRDDGPTDN MVVLPCLKSM TWVMENKNST PANRVAVINL KLQDYSKSPA 720 VESEVKFQLS MVTLEPMLKS MAQISEQLST PANRVAVINL KACFSNLAVF SLLQDTETIS 780 GESEVKFQVS RDTLGAMLRS MAYIREQLSV LVEPQTEQPS KKQRK*

Sequence ? help Back to Top

Protein Sequence Length: 826 aa Download sequence

MGVDIIDVEG GNMRIRASTD NGDAEAIGVE VSPTGVYVAQ DEVHVLEPHV GMEFESESAA  60
KTFYDDYARR AGFSTKICQT GRFRPDSAVT SRQFVCTKEG LKRRPSECEA MLKIDLKGNK  120
WAVTKFIKEH NHALESPSKL HSVRPHRHFP GAVKNVAEVY QAGVMVPSGV MYVTMDGNHV  180
SQTSVEANRL ARSISPVESS RLVKSSNCIN HAIKPATPKR TWGKDAQNML DYFKKMQAEN  240
PGFFYAIQLD EDNRMANAFW ADARSRTAYS HFGDVVTLDT SYKAAVSQEL PKSRHRISKW  300
HILREGQEKL AHVCHMHPNF QAELYNCVNL TETIEEFESS WDFIIDKYDL RRNDWLQSLY  360
NARRQWVPVY FRDTFFAAVS PNQGVKCSFF DGYVNQHTTL PMFFRQYERA MEYWFEKEIE  420
ADFDTISNTP VLSTPSPMEK QAADLYTRKI FTKFQDELVE TFVYTANRID GNGDTSTYRV  480
AKFEDDHKAY TVTLNISDMR ASCSCLMFEY SGILCRHILT VYTVTNVLTL PPHYILRRWT  540
RNAKSVVALD EPGANYAQES TPSRYNSLCR EAVKYAEEGA TASDTYTAAL TGLKEGAKKI  600
AAVKKIVAKV APQTPKKSTS GYDDKKISAA DSPLLWPRLD EVTRQFNLND SATLPHYVSG  660
MNLLRMAPAS VQRDDGPTDN MVVLPCLKSM TWVMENKNST PANRVAVINL KLQDYSKSPA  720
VESEVKFQLS MVTLEPMLKS MAQISEQLST PANRVAVINL KACFSNLAVF SLLQDTETIS  780
GESEVKFQVS RDTLGAMLRS MAYIREQLSV LVEPQTEQPS KKQRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein