PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001553-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 710aa MW: 76618 Da PI: 7.3983

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001553-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	408	445	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + AUR62001553-RA 408 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 445 554459******************************88 PP
2	BELL	46.8	7.4e-16	303	336	39	72
BELL 39 avaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++ag+gsak+YtslAlk+iS++FrcLkdai++qi AUR62001553-RA 303 VAAGIGSAKLYTSLALKTISKQFRCLKDAIMSQI 336 79*******************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MMATYFHGGP EIQAAAAGDH NLQTLYLMNP NFITTAYSEG QTPPNMLFLN PANSLSQGNL 60 PHAPPPQQQQ FIGIPLSGPH PSQDHGRPSP TSSGSQHQIP AALHGLSVSR VHPNLWSPAA 120 NPGSNQAGPI PSAASGPDMA DQMGFRRPMS AHQGLSLSLS PGQQQQNQSQ VTVAAVGGSS 180 TSNGVIIGSK YLKPAQELLE EVVNVGSNST NFNDKANSGG DNTTTNNNGD NRIGDSSGAH 240 KDKAKAAAKA AAAAEMSTAQ RQELQMKKAK ECLVTGYSDS DYAADVDTRR SVTGYVFTLG 300 GSVAAGIGSA KLYTSLALKT ISKQFRCLKD AIMSQIKATS KSLGEEESNS NALGVKLEGG 360 AGSRLRFVDH QLRQQRALQQ LGMMQHNAWR PQRGLPERAV SVLRAWLFEH FLHPYPKDSD 420 KHMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYLEEVK TQEQNSGNSE DNTTTANKNG 480 KSSKNDDHTT SKETGAGQQR EQQDHGGAVI QPHQQQADHT TNDMISNLSA MSATSSQGFT 540 LIGSSSDMES LMARSPKKQR SNSDIQNSPS SILSMDMEMK PVDHHQRHSF LMTNHGDAAA 600 TGFNPYLVND MTGRFNPDQM TAHPYHGNAV SLTLGLPHCE NLSLGNHQQN FLPNQGIQLG 660 RRLDIGPAEA DFCGISMAQP SHPNNGYESI DIQNRNRFAA HQLLHDFVA*

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MMATYFHGGP EIQAAAAGDH NLQTLYLMNP NFITTAYSEG QTPPNMLFLN PANSLSQGNL  60
PHAPPPQQQQ FIGIPLSGPH PSQDHGRPSP TSSGSQHQIP AALHGLSVSR VHPNLWSPAA  120
NPGSNQAGPI PSAASGPDMA DQMGFRRPMS AHQGLSLSLS PGQQQQNQSQ VTVAAVGGSS  180
TSNGVIIGSK YLKPAQELLE EVVNVGSNST NFNDKANSGG DNTTTNNNGD NRIGDSSGAH  240
KDKAKAAAKA AAAAEMSTAQ RQELQMKKAK ECLVTGYSDS DYAADVDTRR SVTGYVFTLG  300
GSVAAGIGSA KLYTSLALKT ISKQFRCLKD AIMSQIKATS KSLGEEESNS NALGVKLEGG  360
AGSRLRFVDH QLRQQRALQQ LGMMQHNAWR PQRGLPERAV SVLRAWLFEH FLHPYPKDSD  420
KHMLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYLEEVK TQEQNSGNSE DNTTTANKNG  480
KSSKNDDHTT SKETGAGQQR EQQDHGGAVI QPHQQQADHT TNDMISNLSA MSATSSQGFT  540
LIGSSSDMES LMARSPKKQR SNSDIQNSPS SILSMDMEMK PVDHHQRHSF LMTNHGDAAA  600
TGFNPYLVND MTGRFNPDQM TAHPYHGNAV SLTLGLPHCE NLSLGNHQQN FLPNQGIQLG  660
RRLDIGPAEA DFCGISMAQP SHPNNGYESI DIQNRNRFAA HQLLHDFVA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	8e-97	TALE family protein