PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001134-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 243aa    MW: 27294.5 Da    PI: 7.5592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001134-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.53.4e-08127167451
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV+++  +++W A I++      + +++lg+  + eeAa ++++a+ 
  AUR62001134-RA 127 TGVYFK--NKKWQAAIKVD-----KIQIHLGTVRSQEEAAHLYDRAAF 167
                     7**994..68********4.....4********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVSLRRRRLL GLCTGTAENS FLAPFPTLQD ENASENATYS SNSGSVYPIT FNDMNLRIEE  60
RSDPLEEMEP VTANDFGSSK DQHIQPSIIG SNLSKELDTQ PTIEIEVKRR KQHRRRRIHS  120
EEQCAMTGVY FKNKKWQAAI KVDKIQIHLG TVRSQEEAAH LYDRAAFMCG REPNFELTEG  180
EKQQLRKLTW PEFLAMTRTA ITNKKTRRGR VTGKAAPSFQ NSVEGEQGAE GSSASDDANL  240
DS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108134KRRKQHRRRRIHSEEQCAMTGVYFKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-39ERF family protein