PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62001044-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 26383.7 Da PI: 5.0411 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.6 | 3.7e-17 | 26 | 72 | 10 | 56 |
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 e +++Le++Fe +++++ e++ ++A+++gL+ rqV +WFqNrRa+++ AUR62001044-RA 26 EKVKALEKHFEVENKLQPERKVKIAEEVGLEPRQVAIWFQNRRARWR 72 6789******************************************9 PP | |||||||
2 | HD-ZIP_I/II | 113.2 | 1.7e-36 | 19 | 110 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk rl e+vk+LE++Fe e+kL+perKv++a+e+gl+prqva+WFqnrRAR+++kqlE++y L+++ydalk++ +Le+e+ +L +l++ AUR62001044-RA 19 KKSRLCLEKVKALEKHFEVENKLQPERKVKIAEEVGLEPRQVAIWFQNRRARWRAKQLEREYGDLRASYDALKHDYGSLEQEKVDLLGQLND 110 99***********************************************************************************9988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MLERLEEEDN ADTSRQLMKK SRLCLEKVKA LEKHFEVENK LQPERKVKIA EEVGLEPRQV 60 AIWFQNRRAR WRAKQLEREY GDLRASYDAL KHDYGSLEQE KVDLLGQLND LRSKIESRNS 120 EMTTTNTLSN PITINSTNIM NEGTCMNVPL QASPTPSCRT LDPYDMSSST VTATTLSLDG 180 LQLCKAYQDQ IIKMEELGVH NMNNDISGNF FSVDQAPTLH YWYNSDQFN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65310.2 | 1e-40 | HD-ZIP family protein |